Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920678.1_cds_XP_016469764.1_62280
CDS Infomation

[gene=LOC107792090] [db_xref=GeneID:107792090] [protein=DEAD-box ATP-dependent RNA helicase 8-like isoform X2] [protein_id=XP_016469764.1] [location=join(18428..18684,20207..20267,21547..21781,23975..24213,24486..24737,24829..25009,26643..26665)] [gbkey=CDS]
Sequence

ATGAATCCGAGAGCAAGATTTCAACCGCCGGGAATGGGCAGCGGGAGTATGCATCCAAAT
ACTAACTCTAATTTTCAACCTAGAAACCCTCAACAGTATATACAGAGAGGTCCTGCGCCC
TATCAGCACCAACAGCAGCAGCAGCATTTTCAGAACCAGCAAACACAGCAGTGGCTCAGA
AGGAATCAGTCGCCATCTGCTGATTCTACGGTTGACGAGGTTGAAAAGACTGTACAGGCC
GAAGCCGTTGACCAGAGTTCACAAGATTGGAAGGCTAAGTTGAAGATACCATCACCTGAT
ACTCGATACAGAACGGAGGATGTGACAGCAACCAAGGGAAATGAGTTTGAAGACTACTTT
CTTAAGCGTGAACTGCTTATGGGAATTTATGAAAAGGGCTTTGAGAGACCATCTCCGATC
CAAGAGGAAAGCATTCCAATTGCTCTAACTGGAAGTGACATTTTGGCTAGGGCCAAAAAT
GGAACTGGGAAGACTGCTGCCTTCTGCATTCCTGCTTTAGAGAAAATTGATCAAGACAAG
AATGCAATTCAAGCTGTTATTCTTGTCCCAACTCGAGAATTGGCCCTCCAAACATCTCAA
GTTTGTAAAGAACTGGGGAAGCACTTAAAAATTCAAGTCATGGTTACCACTGGGGGGACT
AGCTTAAAGGATGACATTATGAGACTGTATCAGCCAGTTCATTTACTTGTCGGAACTCCT
GGAAGAATTCTTGACCTTGCAAAAAAGGGAGTGTGCATTTTGAAGGATTGCTCCATGCTT
ATAATGGATGAGGCTGATAAGCTTCTCTCACCAGAATTCCAACCTTCCATTGTACAGCTG
ATCCGTTTCATACCTGCAAATCGCCAGATCTTGATGTTTTCTGCTACATTCCCTGTTACT
GTCAAGGACTTTAAAGATAGATATTTGAACAAACCATATGTTATCAACCTCATGGATGAA
CTTACACTCAAGGGTATAACACAATTTTATGCTTTTGTTGAAGAAAGACAGAAGATTCAC
TGCCTTAACACTCTCTTCTCAAAGCTTCAAATTAACCAATCAATTATTTTTTGCAACTCT
GTAAATAGAGTGGAACTTCTTGCGAAGAAGATAACTGAGCTGGGCTATTCATGCTTCTAC
ATTCATGCCAAGATGCTTCAAGATCATAGGAACAGGGTGTTTCATGACTTCCGCAATGGT
GCCTGCAGGAACCTTGTTTGTACTGGTACAGAATTGAACAAGAACTAG

Peptide Sequence

PEP ID

XP_016469764.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like isoform X2 [Nicotiana tabacum]
Sequence

MNPRARFQPPGMGSGSMHPNTNSNFQPRNPQQYIQRGPAPYQHQQQQQHFQNQQTQQWLR
RNQSPSADSTVDEVEKTVQAEAVDQSSQDWKAKLKIPSPDTRYRTEDVTATKGNEFEDYF
LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDK
NAIQAVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTP
GRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSIVQLIRFIPANRQILMFSATFPVT
VKDFKDRYLNKPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNS
VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTGTELNKN

Transcript Sequence

Gene sequence data has not been registered.